0a
.github/CONTRIBUTING.md	libbloom
.gitignore	haproxy,libbloom,roary
.pc/.quilt_patches	haproxy,libbloom,roary
.pc/.quilt_series	haproxy,libbloom,roary
.pc/.version	haproxy,libbloom,roary
.pc/0001-Disable-static-linked-library.patch/Makefile	libbloom
.pc/0002-Use-dpkg-buildflags-to-build-halog.patch/contrib/halog/Makefile	haproxy
.pc/applied-patches	haproxy,libbloom,roary
.pc/haproxy.service-add-documentation.patch/contrib/systemd/haproxy.service.in	haproxy
.pc/haproxy.service-start-after-syslog.patch/contrib/systemd/haproxy.service.in	haproxy
.pc/haproxy.service-use-environment-variables.patch/contrib/systemd/haproxy.service.in	haproxy
.pc/rename_R_script.patch/lib/Bio/Roary/PostAnalysis.pm	roary
.travis.yml	roary
AUTHORS	roary
CHANGELOG	haproxy
CONTRIBUTING	haproxy
Dockerfile	roary
GPL-LICENSE	roary
LICENSE	haproxy,libbloom
MAINTAINERS	haproxy
Makefile	haproxy,libbloom
README	haproxy,libbloom
README.md	roary
ROADMAP	haproxy
SUBVERS	haproxy
VERDATE	haproxy
VERSION	haproxy
bin/create_pan_genome	roary
bin/create_pan_genome_plots.R	roary
bin/extract_proteome_from_gff	roary
bin/iterative_cdhit	roary
bin/pan_genome_assembly_statistics	roary
bin/pan_genome_core_alignment	roary
bin/pan_genome_post_analysis	roary
bin/pan_genome_reorder_spreadsheet	roary
bin/parallel_all_against_all_blastp	roary
bin/protein_alignment_from_nucleotides	roary
bin/query_pan_genome	roary
bin/roary	roary
bin/roary-create_pan_genome_plots.R	roary
bin/roary-pan_genome_reorder_spreadsheet	roary
bin/roary-query_pan_genome	roary
bin/transfer_annotation_to_groups	roary
bloom.c	libbloom
bloom.h	libbloom
contrib/base64/base64rev-gen.c	haproxy
contrib/debug/Makefile	haproxy
contrib/debug/flags.c	haproxy
contrib/halog/Makefile	haproxy
contrib/halog/fgets2.c	haproxy
contrib/halog/halog.c	haproxy
contrib/ip6range/Makefile	haproxy
contrib/ip6range/ip6range.c	haproxy
contrib/iprange/Makefile	haproxy
contrib/iprange/iprange.c	haproxy
contrib/netsnmp-perl/README	haproxy
contrib/netsnmp-perl/cacti_data_query_haproxy_backends.xml	haproxy
contrib/netsnmp-perl/cacti_data_query_haproxy_frontends.xml	haproxy
contrib/netsnmp-perl/haproxy.pl	haproxy
contrib/netsnmp-perl/haproxy_backend.xml	haproxy
contrib/netsnmp-perl/haproxy_frontend.xml	haproxy
contrib/netsnmp-perl/haproxy_socket.xml	haproxy
contrib/selinux/README	haproxy
contrib/selinux/haproxy.fc	haproxy
contrib/selinux/haproxy.if	haproxy
contrib/selinux/haproxy.te	haproxy
contrib/spoa_example/Makefile	haproxy
contrib/spoa_example/README	haproxy
contrib/spoa_example/spoa.c	haproxy
contrib/systemd/Makefile	haproxy
contrib/systemd/haproxy.service.in	haproxy
contrib/tcploop/Makefile	haproxy
contrib/tcploop/tcploop.c	haproxy
contrib/trace/trace.awk	haproxy
debian/NEWS	haproxy
debian/README.Debian	haproxy
debian/changelog	haproxy,libbloom,roary
debian/clean	haproxy
debian/compat	haproxy,libbloom,roary
debian/control	haproxy,libbloom,roary
debian/copyright	haproxy,libbloom,roary
debian/dconv/LICENSE	haproxy
debian/dconv/NOTICE	haproxy
debian/dconv/README.md	haproxy
debian/dconv/css/check.png	haproxy
debian/dconv/css/cross.png	haproxy
debian/dconv/css/page.css	haproxy
debian/dconv/haproxy-dconv.py	haproxy
debian/dconv/img/logo-med.png	haproxy
debian/dconv/js/typeahead.bundle.js	haproxy
debian/dconv/parser/__init__.py	haproxy
debian/dconv/parser/arguments.py	haproxy
debian/dconv/parser/example.py	haproxy
debian/dconv/parser/keyword.py	haproxy
debian/dconv/parser/seealso.py	haproxy
debian/dconv/parser/table.py	haproxy
debian/dconv/parser/underline.py	haproxy
debian/dconv/templates/parser/arguments.tpl	haproxy
debian/dconv/templates/parser/example.tpl	haproxy
debian/dconv/templates/parser/example/comment.tpl	haproxy
debian/dconv/templates/parser/seealso.tpl	haproxy
debian/dconv/templates/parser/table.tpl	haproxy
debian/dconv/templates/parser/table/header.tpl	haproxy
debian/dconv/templates/parser/table/row.tpl	haproxy
debian/dconv/templates/parser/underline.tpl	haproxy
debian/dconv/templates/summary.html	haproxy
debian/dconv/templates/template.html	haproxy
debian/dconv/tools/generate-docs.sh	haproxy
debian/gbp.conf	haproxy
debian/halog.1	haproxy
debian/haproxy-doc.doc-base.haproxy	haproxy
debian/haproxy-doc.doc-base.haproxy-lua	haproxy
debian/haproxy-doc.install	haproxy
debian/haproxy-doc.links	haproxy
debian/haproxy-doc.maintscript	haproxy
debian/haproxy.README.Debian	haproxy
debian/haproxy.cfg	haproxy
debian/haproxy.default	haproxy
debian/haproxy.dirs	haproxy
debian/haproxy.docs	haproxy
debian/haproxy.examples	haproxy
debian/haproxy.init	haproxy
debian/haproxy.install	haproxy
debian/haproxy.lintian-overrides	haproxy
debian/haproxy.maintscript	haproxy
debian/haproxy.manpages	haproxy
debian/haproxy.postinst	haproxy
debian/haproxy.postrm	haproxy
debian/haproxy.tmpfile	haproxy
debian/haproxy.vim	haproxy
debian/libbloom-dev.docs	libbloom
debian/libbloom-dev.install	libbloom
debian/libbloom1.install	libbloom
debian/lintian-overrides	roary
debian/logrotate.conf	haproxy
debian/patches/0001-Disable-static-linked-library.patch	libbloom
debian/patches/0002-Use-dpkg-buildflags-to-build-halog.patch	haproxy
debian/patches/add_abstract.patch	roary
debian/patches/debianize-dconv.patch	haproxy
debian/patches/fix_log_message.patch	roary
debian/patches/haproxy.service-add-documentation.patch	haproxy
debian/patches/haproxy.service-start-after-syslog.patch	haproxy
debian/patches/haproxy.service-use-environment-variables.patch	haproxy
debian/patches/prank_seed.patch	roary
debian/patches/rename_R_script.patch	roary
debian/patches/series	haproxy,libbloom,roary
debian/patches/spelling.patch	roary
debian/rsyslog.conf	haproxy
debian/rules	haproxy,libbloom,roary
debian/source.lintian-overrides	roary
debian/source/format	haproxy,libbloom,roary
debian/source/include-binaries	haproxy
debian/tests/cli	haproxy
debian/tests/control	haproxy,roary
debian/tests/expected_files.out	roary
debian/tests/test-installed	roary
debian/upstream/metadata	roary
debian/vim-haproxy.install	haproxy
debian/vim-haproxy.yaml	haproxy
debian/watch	haproxy,libbloom,roary
deployment_process	roary
dist.ini	roary
doc/51Degrees-device-detection.txt	haproxy
doc/DeviceAtlas-device-detection.txt	haproxy
doc/SPOE.txt	haproxy
doc/WURFL-device-detection.txt	haproxy
doc/acl.fig	haproxy
doc/architecture.txt	haproxy
doc/close-options.txt	haproxy
doc/coding-style.txt	haproxy
doc/configuration.txt	haproxy
doc/cookie-options.txt	haproxy
doc/design-thoughts/backends-v0.txt	haproxy
doc/design-thoughts/backends.txt	haproxy
doc/design-thoughts/be-fe-changes.txt	haproxy
doc/design-thoughts/binding-possibilities.txt	haproxy
doc/design-thoughts/buffer-redesign.txt	haproxy
doc/design-thoughts/buffers.fig	haproxy
doc/design-thoughts/config-language.txt	haproxy
doc/design-thoughts/connection-reuse.txt	haproxy
doc/design-thoughts/connection-sharing.txt	haproxy
doc/design-thoughts/dynamic-buffers.txt	haproxy
doc/design-thoughts/entities-v2.txt	haproxy
doc/design-thoughts/how-it-works.txt	haproxy
doc/design-thoughts/http2.txt	haproxy
doc/design-thoughts/http_load_time.url	haproxy
doc/design-thoughts/rate-shaping.txt	haproxy
doc/design-thoughts/sess_par_sec.txt	haproxy
doc/gpl.txt	haproxy
doc/haproxy.1	haproxy
doc/internals/acl.txt	haproxy
doc/internals/body-parsing.txt	haproxy
doc/internals/buffer-operations.txt	haproxy
doc/internals/buffer-ops.fig	haproxy
doc/internals/connect-status.txt	haproxy
doc/internals/connection-header.txt	haproxy
doc/internals/connection-scale.txt	haproxy
doc/internals/entities-v2.txt	haproxy
doc/internals/entities.fig	haproxy
doc/internals/entities.pdf	haproxy
doc/internals/entities.svg	haproxy
doc/internals/entities.txt	haproxy
doc/internals/filters.txt	haproxy
doc/internals/hashing.txt	haproxy
doc/internals/header-parser-speed.txt	haproxy
doc/internals/header-tree.txt	haproxy
doc/internals/http-cookies.txt	haproxy
doc/internals/http-docs.txt	haproxy
doc/internals/http-parsing.txt	haproxy
doc/internals/list.fig	haproxy
doc/internals/lua_socket.fig	haproxy
doc/internals/lua_socket.pdf	haproxy
doc/internals/naming.txt	haproxy
doc/internals/pattern.dia	haproxy
doc/internals/pattern.pdf	haproxy
doc/internals/polling-states.fig	haproxy
doc/internals/repartition-be-fe-fi.txt	haproxy
doc/internals/sequence.fig	haproxy
doc/internals/stats-v2.txt	haproxy
doc/internals/stream-sock-states.fig	haproxy
doc/intro.txt	haproxy
doc/lgpl.txt	haproxy
doc/linux-syn-cookies.txt	haproxy
doc/lua-api/Makefile	haproxy
doc/lua-api/_static/channel.fig	haproxy
doc/lua-api/_static/channel.png	haproxy
doc/lua-api/conf.py	haproxy
doc/lua-api/index.rst	haproxy
doc/lua.txt	haproxy
doc/management.txt	haproxy
doc/netscaler-client-ip-insertion-protocol.txt	haproxy
doc/network-namespaces.txt	haproxy
doc/proxy-protocol.txt	haproxy
doc/queuing.fig	haproxy
docs/contributing.md	libbloom
ebtree/LICENSE	haproxy
ebtree/compiler.h	haproxy
ebtree/eb32tree.c	haproxy
ebtree/eb32tree.h	haproxy
ebtree/eb64tree.c	haproxy
ebtree/eb64tree.h	haproxy
ebtree/ebimtree.c	haproxy
ebtree/ebimtree.h	haproxy
ebtree/ebistree.c	haproxy
ebtree/ebistree.h	haproxy
ebtree/ebmbtree.c	haproxy
ebtree/ebmbtree.h	haproxy
ebtree/ebpttree.c	haproxy
ebtree/ebpttree.h	haproxy
ebtree/ebsttree.c	haproxy
ebtree/ebsttree.h	haproxy
ebtree/ebtree.c	haproxy
ebtree/ebtree.h	haproxy
examples/acl-content-sw.cfg	haproxy
examples/auth.cfg	haproxy
examples/check	haproxy
examples/check.conf	haproxy
examples/content-sw-sample.cfg	haproxy
examples/debug2ansi	haproxy
examples/debug2html	haproxy
examples/debugfind	haproxy
examples/errorfiles/400.http	haproxy
examples/errorfiles/403.http	haproxy
examples/errorfiles/408.http	haproxy
examples/errorfiles/500.http	haproxy
examples/errorfiles/502.http	haproxy
examples/errorfiles/503.http	haproxy
examples/errorfiles/504.http	haproxy
examples/errorfiles/README	haproxy
examples/haproxy.init	haproxy
examples/haproxy.spec	haproxy
examples/haproxy.vim	haproxy
examples/init.haproxy	haproxy
examples/option-http_proxy.cfg	haproxy
examples/seamless_reload.txt	haproxy
examples/ssl.cfg	haproxy
examples/stats_haproxy.sh	haproxy
examples/transparent_proxy.cfg	haproxy
examples/wurfl-example.cfg	haproxy
include/common/accept4.h	haproxy
include/common/base64.h	haproxy
include/common/buffer.h	haproxy
include/common/cfgparse.h	haproxy
include/common/chunk.h	haproxy
include/common/compat.h	haproxy
include/common/compiler.h	haproxy
include/common/config.h	haproxy
include/common/debug.h	haproxy
include/common/defaults.h	haproxy
include/common/epoll.h	haproxy
include/common/errors.h	haproxy
include/common/hash.h	haproxy
include/common/memory.h	haproxy
include/common/mini-clist.h	haproxy
include/common/namespace.h	haproxy
include/common/rbtree.h	haproxy
include/common/regex.h	haproxy
include/common/splice.h	haproxy
include/common/standard.h	haproxy
include/common/syscall.h	haproxy
include/common/template.h	haproxy
include/common/ticks.h	haproxy
include/common/time.h	haproxy
include/common/tools.h	haproxy
include/common/uri_auth.h	haproxy
include/common/version.h	haproxy
include/import/51d.h	haproxy
include/import/da.h	haproxy
include/import/lru.h	haproxy
include/import/xxhash.h	haproxy
include/proto/acl.h	haproxy
include/proto/action.h	haproxy
include/proto/applet.h	haproxy
include/proto/arg.h	haproxy
include/proto/auth.h	haproxy
include/proto/backend.h	haproxy
include/proto/channel.h	haproxy
include/proto/checks.h	haproxy
include/proto/cli.h	haproxy
include/proto/compression.h	haproxy
include/proto/connection.h	haproxy
include/proto/dns.h	haproxy
include/proto/fd.h	haproxy
include/proto/filters.h	haproxy
include/proto/flt_http_comp.h	haproxy
include/proto/freq_ctr.h	haproxy
include/proto/frontend.h	haproxy
include/proto/hdr_idx.h	haproxy
include/proto/hlua.h	haproxy
include/proto/hlua_fcn.h	haproxy
include/proto/lb_chash.h	haproxy
include/proto/lb_fas.h	haproxy
include/proto/lb_fwlc.h	haproxy
include/proto/lb_fwrr.h	haproxy
include/proto/lb_map.h	haproxy
include/proto/listener.h	haproxy
include/proto/log.h	haproxy
include/proto/map.h	haproxy
include/proto/obj_type.h	haproxy
include/proto/openssl-compat.h	haproxy
include/proto/pattern.h	haproxy
include/proto/payload.h	haproxy
include/proto/peers.h	haproxy
include/proto/pipe.h	haproxy
include/proto/port_range.h	haproxy
include/proto/proto_http.h	haproxy
include/proto/proto_tcp.h	haproxy
include/proto/proto_udp.h	haproxy
include/proto/proto_uxst.h	haproxy
include/proto/protocol.h	haproxy
include/proto/proxy.h	haproxy
include/proto/queue.h	haproxy
include/proto/raw_sock.h	haproxy
include/proto/sample.h	haproxy
include/proto/server.h	haproxy
include/proto/session.h	haproxy
include/proto/shctx.h	haproxy
include/proto/signal.h	haproxy
include/proto/ssl_sock.h	haproxy
include/proto/stats.h	haproxy
include/proto/stick_table.h	haproxy
include/proto/stream.h	haproxy
include/proto/stream_interface.h	haproxy
include/proto/task.h	haproxy
include/proto/tcp_rules.h	haproxy
include/proto/template.h	haproxy
include/proto/vars.h	haproxy
include/proto/wurfl.h	haproxy
include/types/acl.h	haproxy
include/types/action.h	haproxy
include/types/applet.h	haproxy
include/types/arg.h	haproxy
include/types/auth.h	haproxy
include/types/backend.h	haproxy
include/types/capture.h	haproxy
include/types/channel.h	haproxy
include/types/checks.h	haproxy
include/types/cli.h	haproxy
include/types/compression.h	haproxy
include/types/connection.h	haproxy
include/types/counters.h	haproxy
include/types/dns.h	haproxy
include/types/fd.h	haproxy
include/types/filters.h	haproxy
include/types/freq_ctr.h	haproxy
include/types/global.h	haproxy
include/types/hdr_idx.h	haproxy
include/types/hlua.h	haproxy
include/types/lb_chash.h	haproxy
include/types/lb_fas.h	haproxy
include/types/lb_fwlc.h	haproxy
include/types/lb_fwrr.h	haproxy
include/types/lb_map.h	haproxy
include/types/listener.h	haproxy
include/types/log.h	haproxy
include/types/mailers.h	haproxy
include/types/map.h	haproxy
include/types/obj_type.h	haproxy
include/types/pattern.h	haproxy
include/types/peers.h	haproxy
include/types/pipe.h	haproxy
include/types/port_range.h	haproxy
include/types/proto_http.h	haproxy
include/types/proto_udp.h	haproxy
include/types/protocol.h	haproxy
include/types/proxy.h	haproxy
include/types/queue.h	haproxy
include/types/sample.h	haproxy
include/types/server.h	haproxy
include/types/session.h	haproxy
include/types/signal.h	haproxy
include/types/ssl_sock.h	haproxy
include/types/stats.h	haproxy
include/types/stick_table.h	haproxy
include/types/stream.h	haproxy
include/types/stream_interface.h	haproxy
include/types/task.h	haproxy
include/types/template.h	haproxy
include/types/vars.h	haproxy
install_dependencies.sh	roary
lib/Bio/Roary.pm	roary
lib/Bio/Roary/AccessoryBinaryFasta.pm	roary
lib/Bio/Roary/AccessoryClustering.pm	roary
lib/Bio/Roary/AnalyseGroups.pm	roary
lib/Bio/Roary/AnnotateGroups.pm	roary
lib/Bio/Roary/AssemblyStatistics.pm	roary
lib/Bio/Roary/BedFromGFFRole.pm	roary
lib/Bio/Roary/ChunkFastaFile.pm	roary
lib/Bio/Roary/ClustersRole.pm	roary
lib/Bio/Roary/CombinedProteome.pm	roary
lib/Bio/Roary/CommandLine/AssemblyStatistics.pm	roary
lib/Bio/Roary/CommandLine/Common.pm	roary
lib/Bio/Roary/CommandLine/CreatePanGenome.pm	roary
lib/Bio/Roary/CommandLine/ExtractProteomeFromGff.pm	roary
lib/Bio/Roary/CommandLine/GeneAlignmentFromNucleotides.pm	roary
lib/Bio/Roary/CommandLine/IterativeCdhit.pm	roary
lib/Bio/Roary/CommandLine/ParallelAllAgainstAllBlastp.pm	roary
lib/Bio/Roary/CommandLine/QueryRoary.pm	roary
lib/Bio/Roary/CommandLine/Roary.pm	roary
lib/Bio/Roary/CommandLine/RoaryCoreAlignment.pm	roary
lib/Bio/Roary/CommandLine/RoaryPostAnalysis.pm	roary
lib/Bio/Roary/CommandLine/RoaryReorderSpreadsheet.pm	roary
lib/Bio/Roary/CommandLine/TransferAnnotationToGroups.pm	roary
lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm	roary
lib/Bio/Roary/Exceptions.pm	roary
lib/Bio/Roary/External/Blastp.pm	roary
lib/Bio/Roary/External/Cdhit.pm	roary
lib/Bio/Roary/External/CheckTools.pm	roary
lib/Bio/Roary/External/Fasttree.pm	roary
lib/Bio/Roary/External/GeneAlignmentFromNucleotides.pm	roary
lib/Bio/Roary/External/IterativeCdhit.pm	roary
lib/Bio/Roary/External/Mafft.pm	roary
lib/Bio/Roary/External/Makeblastdb.pm	roary
lib/Bio/Roary/External/Mcl.pm	roary
lib/Bio/Roary/External/PostAnalysis.pm	roary
lib/Bio/Roary/External/Prank.pm	roary
lib/Bio/Roary/ExtractCoreGenesFromSpreadsheet.pm	roary
lib/Bio/Roary/ExtractProteomeFromGFF.pm	roary
lib/Bio/Roary/ExtractProteomeFromGFFs.pm	roary
lib/Bio/Roary/FilterFullClusters.pm	roary
lib/Bio/Roary/FilterUnknownsFromFasta.pm	roary
lib/Bio/Roary/GeneNamesFromGFF.pm	roary
lib/Bio/Roary/GroupLabels.pm	roary
lib/Bio/Roary/GroupStatistics.pm	roary
lib/Bio/Roary/InflateClusters.pm	roary
lib/Bio/Roary/IterativeCdhit.pm	roary
lib/Bio/Roary/JobRunner/Local.pm	roary
lib/Bio/Roary/JobRunner/Parallel.pm	roary
lib/Bio/Roary/JobRunner/Role.pm	roary
lib/Bio/Roary/LookupGeneFiles.pm	roary
lib/Bio/Roary/MergeMultifastaAlignments.pm	roary
lib/Bio/Roary/OrderGenes.pm	roary
lib/Bio/Roary/Output/BlastIdentityFrequency.pm	roary
lib/Bio/Roary/Output/CoreGeneAlignmentCoordinatesEMBL.pm	roary
lib/Bio/Roary/Output/DifferenceBetweenSets.pm	roary
lib/Bio/Roary/Output/EMBLHeaderCommon.pm	roary
lib/Bio/Roary/Output/EmblGroups.pm	roary
lib/Bio/Roary/Output/GroupMultifasta.pm	roary
lib/Bio/Roary/Output/GroupsMultifastaNucleotide.pm	roary
lib/Bio/Roary/Output/GroupsMultifastaProtein.pm	roary
lib/Bio/Roary/Output/GroupsMultifastas.pm	roary
lib/Bio/Roary/Output/GroupsMultifastasNucleotide.pm	roary
lib/Bio/Roary/Output/NumberOfGroups.pm	roary
lib/Bio/Roary/Output/QueryGroups.pm	roary
lib/Bio/Roary/ParallelAllAgainstAllBlast.pm	roary
lib/Bio/Roary/ParseGFFAnnotationRole.pm	roary
lib/Bio/Roary/PostAnalysis.pm	roary
lib/Bio/Roary/PrepareInputFiles.pm	roary
lib/Bio/Roary/PresenceAbsenceMatrix.pm	roary
lib/Bio/Roary/QC/Report.pm	roary
lib/Bio/Roary/ReformatInputGFFs.pm	roary
lib/Bio/Roary/ReorderSpreadsheet.pm	roary
lib/Bio/Roary/SampleOrder.pm	roary
lib/Bio/Roary/SequenceLengths.pm	roary
lib/Bio/Roary/SortFasta.pm	roary
lib/Bio/Roary/SplitGroups.pm	roary
lib/Bio/Roary/SpreadsheetRole.pm	roary
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t/Bio/Roary/AssemblyStatistics.t	roary
t/Bio/Roary/ChunkFastaFile.t	roary
t/Bio/Roary/CombinedProteome.t	roary
t/Bio/Roary/CommandLine/ExtractProteomeFromGff.t	roary
t/Bio/Roary/CommandLine/GeneAlignmentFromNucleotides.t	roary
t/Bio/Roary/CommandLine/ParallelAllAgainstAllBlastp.t	roary
t/Bio/Roary/CommandLine/QueryRoary.t	roary
t/Bio/Roary/CommandLine/Roary.t	roary
t/Bio/Roary/CommandLine/RoaryCoreAlignment.t	roary
t/Bio/Roary/CommandLine/RoaryPostAnalysis.t	roary
t/Bio/Roary/CommandLine/RoaryReorderSpreadsheet.t	roary
t/Bio/Roary/CommandLine/TransferAnnotationToGroups.t	roary
t/Bio/Roary/ContigsToGeneIDsFromGFF.t	roary
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t/Bio/Roary/External/Makeblastdb.t	roary
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t/Bio/Roary/ExtractCoreGenesFromSpreadsheet.t	roary
t/Bio/Roary/ExtractProteomeFromGFFs.t	roary
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t/Bio/Roary/GeneNamesFromGFF.t	roary
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t/Bio/Roary/GroupStatistics.t	roary
t/Bio/Roary/InflateClusters.t	roary
t/Bio/Roary/OrderGenes.t	roary
t/Bio/Roary/Output/CoreGeneAlignmentCoorindatesEMBL.t	roary
t/Bio/Roary/Output/DifferenceBetweenSets.t	roary
t/Bio/Roary/Output/GroupsMultifastaProtein.t	roary
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t/data/expected_core_60_summary_statistics.txt	roary
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t/data/expected_create_pan_genome.fa	roary
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t/data/expected_gff_set_difference_common_set_statistics.csv	roary
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t/data/expected_mafft_input.fa.aln	roary
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t/data/expected_nuc_multifasta.fa.aln	roary
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t/data/expected_number_of_conserved_genes.tab	roary
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tests/test-cookie-insert.cfg	haproxy
tests/test-cookie-passive.cfg	haproxy
tests/test-cookie-prefix.cfg	haproxy
tests/test-cookie-rewrite.cfg	haproxy
tests/test-disable-404.cfg	haproxy
tests/test-fsm.cfg	haproxy
tests/test-fwlc.cfg	haproxy
tests/test-fwrr.cfg	haproxy
tests/test-http-send-name-hdr.cfg	haproxy
tests/test-http-set-status-lua.cfg	haproxy
tests/test-http-set-status.cfg	haproxy
tests/test-inspect-smtp.cfg	haproxy
tests/test-inspect-ssl.cfg	haproxy
tests/test-map-ports.cfg	haproxy
tests/test-pollers.cfg	haproxy
tests/test-redirect.cfg	haproxy
tests/test-sample-fetch-args.cfg	haproxy
tests/test-sample-fetch-conv.cfg	haproxy
tests/test-sql.cfg	haproxy
tests/test-str2sa.cfg	haproxy
tests/test-time.cfg	haproxy
tests/test-timeout.cfg	haproxy
tests/test-url-hash.cfg	haproxy
tests/test-valid-names.cfg	haproxy
tests/test.c	haproxy
tests/test_hashes.c	haproxy
tests/test_pools.c	haproxy
tests/testinet.c	haproxy
tests/uri_hash.c	haproxy
.
